Most common sporadic fatal viral encephalitis; temporal-lobe predilection; treat empirically with acyclovir.
Also known as: HSV encephalitis, herpes simplex encephalitis, HSE, HSV-1 encephalitis
Overview
Acute necrotizing inflammation of the brain parenchyma caused by herpes simplex virus, most commonly HSV-1 in adults and HSV-2 in neonates. Characteristic predilection for the medial temporal and inferior frontal lobes (limbic system) produces a recognizable clinical and imaging phenotype.
Epidemiology
Most common cause of sporadic (non-epidemic) fatal viral encephalitis in the US; ~1 case per 250,000-500,000 persons annually (about 2-4 per million). Bimodal distribution: children/young adults and adults >50. Untreated mortality ~70%; with prompt acyclovir, mortality drops to 20-30%, but many survivors have significant neurologic sequelae.
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Question 1NeurologyMedium
A 58-year-old man is brought to the emergency department after 3 days of fever, headache, and progressively bizarre behavior; this morning his wife witnessed a brief episode of lip-smacking followed by a generalized seizure. On exam his temperature is 38.9°C (102°F), he is disoriented and has difficulty naming objects, and there is no neck stiffness. MRI shows T2/FLAIR hyperintensity in the left medial temporal lobe and insula. Lumbar puncture reveals a lymphocytic pleocytosis with elevated protein, normal glucose, and red blood cells in the absence of a traumatic tap. Which of the following is the most appropriate next diagnostic test to confirm the diagnosis?
ASerum anti-NMDA receptor antibodies
BSerum HSV-1 and HSV-2 IgG antibodies
CCSF Gram stain and bacterial culture
DCSF VDRL and treponemal antibody
ECSF herpes simplex virus (HSV) PCR
Reveal answer & full explanation
Correct answer: E — CSF herpes simplex virus (HSV) PCR
ASerum anti-NMDA receptor antibodies
BSerum HSV-1 and HSV-2 IgG antibodies
CCSF Gram stain and bacterial culture
DCSF VDRL and treponemal antibody
ECSF herpes simplex virus (HSV) PCR✓
Why CSF herpes simplex virus (HSV) PCR is correct
The vignette is classic herpes simplex encephalitis (HSE): fever, altered mental status, temporal-lobe seizure with automatisms (lip-smacking), aphasia, asymmetric medial temporal and insular MRI changes, and lymphocytic CSF with RBCs from a necrotizing, hemorrhagic process.
CSF HSV PCR is the gold-standard confirmatory test (sensitivity ~95-98%, specificity ~95-99%). It can be falsely negative in the first 24-72 hours, so repeat it if suspicion persists, and start empiric IV acyclovir immediately rather than waiting for the result.
Why the others are wrong
CSF Gram stain and bacterial culture: useful to exclude bacterial meningitis, but that shows neutrophilic pleocytosis with low glucose, not this lymphocytic, RBC-containing profile with focal temporal findings.
Serum anti-NMDA receptor antibodies: tested when neuropsychiatric or movement symptoms relapse 2-12 weeks after HSE (post-HSV autoimmune encephalitis), not to confirm the acute infection; note also that CSF, not serum, is the preferred specimen for anti-NMDA receptor antibody testing, since serum alone is less sensitive and can be falsely positive.
CSF VDRL and treponemal antibody: screen for neurosyphilis, which causes a chronic picture (general paresis, tabes dorsalis, Argyll Robertson pupils), not acute temporal-lobe necrotizing encephalitis.
Serum HSV-1 and HSV-2 IgG antibodies — tempting because it targets the right virus, but most adults are already HSV-1 seropositive and HSE in adults usually reflects reactivation, so a positive serum IgG shows only past exposure and cannot confirm CNS infection; confirmation requires detecting HSV DNA in the CSF.
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No major host risk factors in most cases (immunocompetent patients are affected)
Neonatal HSE: maternal genital HSV (especially primary infection near delivery)
Rare familial defects in TLR3 / UNC93B / TRIF pathway (impaired innate immunity to HSV in CNS)
Immunocompromise can produce atypical presentations but is NOT required
Pathophysiology
Primary or reactivated HSV-1 in the trigeminal ganglion is thought to spread from the ganglion along trigeminal nerve fibers to the meninges of the anterior and middle cranial fossae (an olfactory-tract route is an alternative hypothesis), producing necrotizing, hemorrhagic encephalitis of the orbitofrontal and medial temporal lobes. HSV-2 is the principal cause of neonatal HSE (transmitted during delivery) and may cause Mollaret recurrent lymphocytic meningitis in adults.
Clinical presentation
Symptoms
Acute or subacute onset (days) of fever, headache, altered mental status
CSF: lymphocytic pleocytosis (typically 10-500 cells/µL), elevated protein (often 60-200 mg/dL), NORMAL or mildly low glucose, RBCs frequently present (necrotizing process)
CSF HSV PCR — gold standard; sensitivity ~95-98% and specificity ~95-99%; may be negative in first 24-72 hours of illness (REPEAT if initial negative and high clinical suspicion)
Serum and CSF HSV serology (intrathecal antibody synthesis appears after ~7-10 days)
Routine labs: CBC, BMP, LFTs, blood cultures, HIV testing
Anti-NMDA receptor antibodies if symptoms relapse after acyclovir (post-HSE autoimmune encephalitis)
Imaging
MRI brain (preferred): T2/FLAIR hyperintensity in medial temporal lobes, insula, cingulate, and inferior frontal lobes; often bilateral but ASYMMETRIC; restricted diffusion early; gyriform enhancement and hemorrhage on susceptibility-weighted imaging in later stages
CT often normal early; may show low-density temporal lobe changes after several days
EEG: focal slowing or periodic lateralized epileptiform discharges (PLEDs/LPDs) over the involved temporal region — highly suggestive
Diagnostic algorithm
flowchart TD
A["Fever + AMS<br/>± focal Sx, seizure"] --> B["Empiric acyclovir<br/>10 mg/kg IV q8h<br/>+ broad antibiotics"]
B --> L["MRI brain (preferred) early<br/>T2/FLAIR + DWI temporal lobe<br/>± EEG PLEDs"]
B --> C["CT head first<br/>if mass effect risk or no MRI"]
C --> D["Lumbar puncture"]
L --> D
D --> E{CSF}
E --> F["Lymphocytic pleocytosis<br/>+ RBCs<br/>+ elevated protein<br/>± normal glucose"]
F --> G["CSF HSV PCR"]
G --> H{PCR result}
H -->|Positive| I["Continue acyclovir<br/>14-21 days"]
H -->|Negative + high suspicion| J["Repeat PCR in 3-7 d<br/>continue acyclovir"]
H -->|Negative + alternative dx| K["Stop acyclovir<br/>treat underlying cause"]
I --> M["Monitor for relapse<br/>anti-NMDA encephalitis"]
Empiric approach to suspected HSV encephalitis.
Treatment
First-line
IV acyclovir 10 mg/kg q8h (adjust for renal function), started EMPIRICALLY as soon as HSE is suspected — do NOT wait for PCR results
Duration: 14-21 days (21 days preferred in immunocompromised and in severe disease; check end-of-treatment CSF HSV PCR before stopping if any clinical concern)
Maintain hydration during acyclovir (risk of crystal nephropathy)
Anticonvulsants for seizures (levetiracetam preferred initial choice; lacosamide, phenytoin alternatives); continuous EEG if subclinical seizures suspected
If acyclovir-resistant HSV (rare; usually immunocompromised): foscarnet
Consider empiric broad coverage initially (e.g., ceftriaxone, vancomycin, ampicillin, acyclovir) while awaiting workup if meningitis cannot be excluded
If clinical relapse 2-4 weeks after completing acyclovir (especially with new movement disorder, dyskinesias, or psychiatric symptoms), test for anti-NMDA receptor antibody encephalitis and treat with immunotherapy (steroids, IVIG, rituximab)
Rehabilitation (physical, occupational, speech, neuropsych) — most survivors have substantial cognitive, language, and behavioral sequelae
Epilepsy (temporal lobe, often medically refractory)
Personality and behavioral changes
Post-HSE anti-NMDA receptor autoimmune encephalitis (occurs in up to 20-30% of pediatric and ~10% adult cases, typically 2-12 weeks after recovery)
Hydrocephalus from inflammation
Death (~20-30% even with treatment)
Neonatal HSE — disseminated disease (SEM/CNS/disseminated forms), high mortality and severe disability
PANCE pearls
Start IV acyclovir EMPIRICALLY for any patient with encephalitis and lymphocytic CSF — do not wait for PCR. Empiric treatment costs little; delayed treatment costs lives.
RBCs in CSF without trauma + lymphocytic pleocytosis + temporal-lobe symptoms = HSE until proven otherwise.
Early CSF HSV PCR (<72 hours) can be falsely negative; REPEAT if clinical suspicion remains.
MRI is more sensitive than CT for early HSE — request T2/FLAIR and DWI.
Late behavioral relapse after HSE recovery — think anti-NMDA receptor encephalitis (HSV triggers autoimmunity).
HSE is NOT preventable by valacyclovir prophylaxis in immunocompetent patients; in neonates, cesarean delivery for genital lesions or prodromal symptoms at the onset of labor reduces risk, and suppressive acyclovir or valacyclovir from 36 weeks in women with recurrent genital herpes reduces lesions at term.
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