Chlamydia trachomatis Genital Infection and Gonorrhea are easy to mix up on the boards. Here's a side-by-side comparison — presentation, workup, imaging, and first-line treatment — drawn from our full outlines.
Chlamydia trachomatis Genital Infection vs Gonorrhea at a glance
Chlamydia trachomatis Genital Infection: Most common bacterial STI in the US — often asymptomatic; serotypes D-K cause urogenital infection. Cervicitis/urethritis treated with doxycycline.
Gonorrhea: Second most reported STI in the US — gram-negative diplococcus (Neisseria gonorrhoeae); rising antimicrobial resistance has shaped current ceftriaxone-based therapy.
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Question 1Infectious DiseaseMedium
A 21-year-old woman, gravida 1 para 0, at 18 weeks' gestation comes to the clinic because of 1 week of increased yellow vaginal discharge. She has no known drug allergies. Temperature is 37.0 C. Speculum examination shows mucopurulent endocervical discharge and a friable cervix that bleeds easily on swabbing; there is no cervical motion tenderness or adnexal tenderness. Nucleic acid amplification testing of a vaginal swab is positive for Chlamydia trachomatis and negative for Neisseria gonorrhoeae. Which of the following is the most appropriate treatment?
ALevofloxacin 500 mg orally once daily for 7 days
BDoxycycline 100 mg orally twice daily for 7 days
CAzithromycin 1 g orally, taken as a single dose
DMetronidazole 2 g orally, taken as a single dose
Reveal answer & full explanation
Correct answer: C — Azithromycin 1 g orally, taken as a single dose
ALevofloxacin 500 mg orally once daily for 7 days
BDoxycycline 100 mg orally twice daily for 7 days
CAzithromycin 1 g orally, taken as a single dose✓
DMetronidazole 2 g orally, taken as a single dose
Why Azithromycin 1 g orally, taken as a single dose is correct
She has uncomplicated chlamydial cervicitis in pregnancy (mucopurulent endocervical discharge, friable cervix, positive NAAT, and no fever, cervical motion tenderness, or adnexal tenderness to suggest PID); CDC 2021 names azithromycin 1 g orally in a single dose as the recommended regimen for chlamydia in pregnancy.
Azithromycin is safe and effective throughout pregnancy, and the single dose can be taken in the clinic under direct observation, which removes the adherence problem of a 7-day course.
The negative gonorrhea NAAT means azithromycin alone is sufficient; if gonorrhea were positive or not excluded, ceftriaxone 500 mg IM once (1 g if 150 kg or more) would be added.
Treating before delivery prevents vertical transmission, which causes neonatal chlamydial conjunctivitis and afebrile infant pneumonia.
Why the others are wrong
Levofloxacin 500 mg orally once daily for 7 days - Active against chlamydia and a CDC alternative for nonpregnant adults, but although human data suggest low fetal risk, animal studies raise concern for cartilage damage in neonates, and CDC 2021 lists only azithromycin (recommended) and amoxicillin (alternative) for chlamydia in pregnancy (the trap is swapping in the nonpregnant alternative once doxycycline is ruled out).
Doxycycline 100 mg orally twice daily for 7 days - The preferred regimen outside pregnancy, but CDC lists doxycycline as contraindicated in the second and third trimesters because of the risk of fetal tooth discoloration, and at 18 weeks she is in the second trimester (the trap is applying the nonpregnant first-line regimen without checking pregnancy status).
Metronidazole 2 g orally, taken as a single dose - Safe in pregnancy and a familiar single-dose STI regimen, but metronidazole has no useful activity against C. trachomatis, the organism the NAAT identified; even for trichomoniasis, CDC 2021 reserves the 2 g single dose for men and prefers metronidazole 500 mg twice daily for 7 days in women (the trap is choosing a convenient, pregnancy-safe single dose without checking that the drug covers the organism).
Additional high-yield points
The CDC alternative in pregnancy is amoxicillin 500 mg orally three times daily for 7 days; erythromycin is no longer recommended because its gastrointestinal side effects lead to nonadherence.
Pregnancy is the setting where a test of cure is recommended: repeat NAAT about 4 weeks after treatment, then retest 3 months after treatment. Nonpregnant patients treated with a recommended or alternative regimen need only the 3-month retest unless adherence is in doubt, symptoms persist, or reinfection is suspected.
Screen all pregnant patients younger than 25 years, and older patients at increased risk, at the first prenatal visit, and rescreen the same groups in the third trimester; because she is younger than 25, she is rescreened in the third trimester whether or not she remains at risk.
Sex partners from the preceding 60 days need evaluation and treatment (expedited partner therapy where permitted); she should abstain from sex for 7 days after the single dose and until partners are treated.
Neonatal erythromycin eye prophylaxis is ineffective against chlamydial ophthalmia neonatorum and does not prevent infant pneumonia, so prenatal screening and treatment is the real prevention.
Question 2Infectious DiseaseMedium
A 24-year-old sexually active woman presents with 4 days of fever and migratory joint pain that started in her knees and has moved to her right wrist. She reports a new sexual partner in the past month and is currently menstruating. On exam, temperature is 38.4°C (101.1°F). She has pain and swelling along the tendon sheaths of her right wrist and several fingers, and a few scattered pustular lesions on the dorsa of her hands and forearms. Arthrocentesis of the wrist yields cloudy fluid with a negative Gram stain. Which of the following is the most likely diagnosis?
AReactive post-enteric arthritis
BDisseminated gonococcal infection
CPolyarticular rheumatoid arthritis
DStaphylococcal septic arthritis
Reveal answer & full explanation
Correct answer: B — Disseminated gonococcal infection
AReactive post-enteric arthritis
BDisseminated gonococcal infection✓
CPolyarticular rheumatoid arthritis
DStaphylococcal septic arthritis
Why Disseminated gonococcal infection is correct
The classic DGI arthritis-dermatitis syndrome is the triad of migratory asymmetric polyarthralgia/arthritis, tenosynovitis (especially wrists and fingers), and pustular skin lesions on the extremities, with fever.
DGI characteristically strikes young, sexually active patients, and women are at higher risk around menses and during pregnancy, fitting this menstruating 24-year-old with a recent new partner.
Joint fluid Gram stain and culture are frequently negative in the arthritis-dermatitis form because it is largely immune/bacteremic rather than purulent; diagnosis relies on NAAT or culture of genital and extragenital sites plus blood cultures.
CDC 2021 treatment of DGI is ceftriaxone 1 g IV/IM daily for at least 7 days plus empiric chlamydia coverage; recurrent DGI should prompt evaluation for terminal complement deficiency (C5-C9, order CH50).
Why the others are wrong
Reactive post-enteric arthritis is an asymmetric oligoarthritis with conjunctivitis and urethritis after a GU/GI infection (HLA-B27 associated); it does not produce pustular skin lesions with tenosynovitis and fever in this acute STI context.
Staphylococcal septic arthritis is the most common bacterial monoarthritis, but it produces a single hot purulent joint with a frequently positive Gram stain, not migratory polyarthralgia, tenosynovitis, and pustular skin lesions.
Polyarticular rheumatoid arthritis is a symmetric small-joint polyarthritis with morning stiffness developing over weeks to months; it does not present acutely with fever, pustular skin lesions, and a recent sexual-exposure history.
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Most common bacterial STI in the US — often asymptomatic; serotypes D-K cause urogenital infection. Cervicitis/urethritis treated with doxycycline.
Second most reported STI in the US — gram-negative diplococcus (Neisseria gonorrhoeae); rising antimicrobial resistance has shaped current ceftriaxone-based therapy.
Classic presentation
Sexually active young woman with intermenstrual or post-coital bleeding and mucopurulent cervicitis — chlamydia until proven otherwise. Test all sexually active women under 25 annually.; Women (often asymptomatic): mucopurulent cervical discharge, intermenstrual or post-coital bleeding, dysuria; Men: urethral discharge (clearer/whiter…
Young sexually active patient with copious purulent urethral discharge — gonorrhea until proven otherwise. DGI: polyarthralgia, tenosynovitis, and pustular skin lesions in a young woman around menses or pregnancy.; Men (urethritis): purulent yellow-green urethral discharge, dysuria 2-5 days post-exposure; ~10% asymptomatic; Women (often…
Workup / key labs
Positive NAAT in symptomatic or screened asymptomatic patient.; Nucleic acid amplification test (NAAT) — gold standard; sensitivity >95%; Specimens: first-catch urine (men/women), endocervical swab, vaginal swab (provider or patient self-collected), urethral swab, rectal swab, pharyngeal swab; Co-test for gonorrhea at the same time and…
Positive NAAT, culture, or Gram stain (men with symptomatic urethritis) for N. gonorrhoeae.; Nucleic acid amplification test (NAAT) — preferred for genital, rectal, and pharyngeal sites (sensitivity >95%); Specimens: first-catch urine or urethral swab (men), endocervical or vaginal swab (women), pharyngeal and rectal swabs as exposure…
Imaging
Pelvic ultrasound if PID with tubo-ovarian abscess suspected; Generally none required for uncomplicated infection
Pelvic ultrasound if PID/tubo-ovarian abscess suspected; Joint imaging for septic arthritis
First-line treatment
Uncomplicated urogenital chlamydia (CDC 2021):; • Doxycycline 100 mg PO BID × 7 days — preferred (more effective than azithromycin for rectal and pharyngeal infections); • Azithromycin 1 g PO × 1 — alternative if adherence concerns or pregnancy (single dose, observed therapy); Rectal chlamydia: doxycycline 100 mg PO BID × 7 days…
Uncomplicated urogenital, rectal, or pharyngeal gonorrhea (CDC 2021):; • Ceftriaxone 500 mg IM × 1 (1 g IM if patient weighs ≥150 kg); • Empiric chlamydia coverage with doxycycline 100 mg PO BID × 7 days IF chlamydia not excluded (azithromycin 1 g PO × 1 if pregnant); • Mantra: 'Ceftriaxone for gonorrhea + doxycycline for chlamydia';…
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